EnhancerDB
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  3. rs540985758[chr14:78079686]
Enhancers that have rs540985758[chr14:78079686]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 78051370 78081835 enh3344
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Kidney
Transcript factors that have rs540985758[chr14:78079686]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 78079679 78079691 TFAP2A JASPAR yes 116754833
chr14 78079679 78079691 TFAP2B JASPAR yes 116754834
chr14 78079679 78079691 TFAP2C JASPAR yes 116754835
chr14 78079679 78079694 TFAP2A JASPAR yes 116754836
chr14 78079679 78079694 TFAP2C JASPAR yes 116754837
chr14 78079681 78079690 TFAP2A JASPAR yes 116754838
chr14 78079685 78079699 TLX1 JASPAR yes 116754839
chr14 78079686 78079690 LFA1 TRANSFAC yes 116754840
Genes associated with rs540985758[chr14:78079686], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More