EnhancerDB
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  3. rs541019438[chr1:172787433]
Enhancers that have rs541019438[chr1:172787433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172784470 172799215 enh732
Bone Marrow (K562) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs541019438[chr1:172787433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172787084 172787494 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21350256
chr1 172787430 172787760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21350257
chr1 172787433 172787439 GATA3 JASPAR yes 33153754
Genes associated with rs541019438[chr1:172787433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More