EnhancerDB
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  3. rs541039023[chr12:47701574]
Enhancers that have rs541039023[chr12:47701574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47684745 47715015 enh2317
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Epithelial (MCF-7)
chr12 47701468 47701752 vista13276
VISTA
Transcript factors that have rs541039023[chr12:47701574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47701243 47701899 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028615
chr12 47701395 47701925 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028616
chr12 47701399 47701975 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028617
chr12 47701417 47701957 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028618
chr12 47701418 47701934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028619
chr12 47701509 47701993 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028620
chr12 47701512 47701922 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028621
chr12 47701537 47702189 CTCF UCSC Txn Factor no Conserved 108028622
chr12 47701562 47701826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21543278
chr12 47701562 47701826 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108028623
chr12 47701566 47701586 RREB1 JASPAR yes 82397870
chr12 47701566 47701586 RREB1 JASPAR yes 120695134
Genes associated with rs541039023[chr12:47701574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More