EnhancerDB
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  3. rs541043780[chr3:128096901]
Enhancers that have rs541043780[chr3:128096901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 128077025 128109405 enh7522
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Ovary Liver Brain (SK-N-SH) Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs541043780[chr3:128096901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 128096895 128096905 HOXC10 JASPAR yes 5593640
chr3 128096895 128096905 HOXD11 JASPAR yes 5593641
chr3 128096895 128096906 HOXA10 JASPAR yes 5593642
chr3 128096895 128096906 HOXC11 JASPAR yes 5593643
chr3 128096895 128096906 HOXC12 JASPAR yes 5593644
chr3 128096895 128096906 HOXD12 JASPAR yes 5593645
chr3 128096896 128096905 CDX1 JASPAR yes 5593646
chr3 128096896 128096907 CDX2 JASPAR yes 5593647
Genes associated with rs541043780[chr3:128096901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More