EnhancerDB
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  3. rs541044160[chr6:41675454]
Enhancers that have rs541044160[chr6:41675454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs541044160[chr6:41675454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540185
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540186
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540187
chr6 41675448 41675468 TP63 JASPAR yes 101667371
chr6 41675449 41675467 TP53 JASPAR yes 101667372
chr6 41675451 41675466 TP53 JASPAR yes 101667373
chr6 41675452 41675463 NFE2L2 JASPAR yes 101667374
Genes associated with rs541044160[chr6:41675454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More