EnhancerDB
  1. Home
  2. SNP
  3. rs541044306[chr17:76952966]
Enhancers that have rs541044306[chr17:76952966]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs541044306[chr17:76952966]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76952476 76953006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795520
chr17 76952813 76953307 TCF7L2 GTRD no Colon (HCT116) 21795521
chr17 76952956 76952971 TFAP2A JASPAR yes 56193338
chr17 76952956 76952971 TFAP2C JASPAR yes 56193339
chr17 76952959 76952971 TFAP2A JASPAR yes 56193340
chr17 76952959 76952971 TFAP2B JASPAR yes 56193341
chr17 76952959 76952971 TFAP2C JASPAR yes 56193342
chr17 76952960 76952969 TFAP2A JASPAR yes 56193343
chr17 76952964 76952974 SP1 JASPAR yes 56193344
chr17 76952965 76952973 SP1 TRANSFAC yes 56193345
chr17 76952966 76952971 SP1 TRANSFAC yes 56193346
chr17 76952966 76952977 E2F4 JASPAR yes 56193347
Genes associated with rs541044306[chr17:76952966], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More