EnhancerDB
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  3. rs541044424[chr1:226311065]
Enhancers that have rs541044424[chr1:226311065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226305145 226318791 enh953
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs541044424[chr1:226311065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226306383 226311129 ZNF274 GTRD no Bone Marrow (K562) 21386523
chr1 226307491 226311702 ZNF274 GTRD no Bone Marrow (K562) 21386530
chr1 226307639 226311459 ZNF274 GTRD no Bone Marrow (K562) 21386533
chr1 226308015 226311393 ZNF274 GTRD no Bone Marrow (K562) 21386534
chr1 226308084 226311510 ZNF274 GTRD no Cervix (HeLa-S3) 21386538
chr1 226308461 226311099 ZNF274 GTRD no Bone Marrow (K562) 21386624
chr1 226308670 226311087 ZNF274 GTRD no Bone Marrow (K562) 21386649
chr1 226308812 226311069 ZNF274 GTRD no Bone Marrow (K562) 21386670
chr1 226309249 226311151 ZNF274 GTRD no Bone Marrow (K562) 21386755
chr1 226309444 226311533 ZNF274 GTRD no Bone Marrow (K562) 21386781
chr1 226310544 226311069 ZNF274 GTRD no Cervix (HeLa-S3) 21386844
chr1 226311054 226311074 RREB1 JASPAR yes 35793084
chr1 226311061 226311075 PLAG1 JASPAR yes 35793085
Genes associated with rs541044424[chr1:226311065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More