EnhancerDB
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  3. rs541049369[chr17:47468960]
Enhancers that have rs541049369[chr17:47468960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47462845 47474615 enh4461
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Spleen Thymus Heart
Transcript factors that have rs541049369[chr17:47468960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47468945 47468965 RREB1 JASPAR yes 54634412
chr17 47468946 47468967 IRF1 JASPAR yes 54634413
chr17 47468947 47468967 RREB1 JASPAR yes 54634414
chr17 47468952 47468967 FOXP1 JASPAR yes 54634416
chr17 47468952 47468972 RREB1 JASPAR yes 54634417
chr17 47468952 47468973 IRF1 JASPAR yes 54634418
chr17 47468959 47468965 TCF4 TRANSFAC yes 54634419
chr17 47468959 47468974 FOXP1 JASPAR yes 54634420
chr17 47468960 47468971 FOXP2 JASPAR yes 54634421
Genes associated with rs541049369[chr17:47468960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More