EnhancerDB
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  3. rs541057478[chr2:24128977]
Enhancers that have rs541057478[chr2:24128977]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 24121345 24130355 enh5351
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Lung (A549) Stomach Muscle (A673) Placenta Breast Blood (Karpas-422) Pancreas Epithelial (MCF-7)
Transcript factors that have rs541057478[chr2:24128977]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 24128973 24128978 SP1 TRANSFAC yes 72396445
chr2 24128974 24128979 SP1 TRANSFAC yes 72396446
chr2 24128974 24128983 THAP1 JASPAR yes 72396447
chr2 24128977 24128981 LFA1 TRANSFAC yes 72396448
Genes associated with rs541057478[chr2:24128977], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More