EnhancerDB
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  3. rs541060399[chr16:85478345]
Enhancers that have rs541060399[chr16:85478345]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541060399[chr16:85478345]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85477584 85478465 ZNF274 GTRD no Bone Marrow (K562) 21725996
chr16 85477903 85478464 ZNF143 GTRD no Epithelial (MCF-7) 21726004
chr16 85477912 85478457 ZNF274 GTRD no Bone Marrow (K562) 21726005
chr16 85478335 85478353 RARA JASPAR yes 12061832
chr16 85478337 85478351 RORA JASPAR yes 12061833
Genes associated with rs541060399[chr16:85478345], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More