EnhancerDB
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  3. rs541119611[chr19:14482130]
Enhancers that have rs541119611[chr19:14482130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs541119611[chr19:14482130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14481714 14483136 TCF7L2 GTRD no Colon (HCT116) 21853517
chr19 14481736 14483143 TCF7L2 GTRD no Colon (HCT116) 21853518
chr19 14481761 14482948 ZNF143 GTRD no Epithelial (MCF-7) 21853519
chr19 14481798 14483112 ZNF143 GTRD no Epithelial (MCF-7) 21853520
chr19 14481807 14483095 ZNF143 GTRD no Epithelial (MCF-7) 21853521
chr19 14481845 14483084 ZNF143 GTRD no Epithelial (MCF-7) 21853522
chr19 14481862 14483014 ZNF274 GTRD no Bone Marrow (K562) 21853523
chr19 14481879 14482542 ZNF274 GTRD no Cervix (HeLa-S3) 21853524
chr19 14481918 14482417 ZNF274 GTRD no Bone Marrow (K562) 21853525
chr19 14482016 14482653 ZNF274 GTRD no Cervix (HeLa-S3) 21853526
chr19 14482026 14482575 ZNF274 GTRD no Bone Marrow (K562) 21853527
chr19 14482065 14482668 ZNF274 GTRD no Bone Marrow (K562) 21853528
chr19 14482115 14482569 ZNF274 GTRD no Bone Marrow (K562) 21853529
chr19 14482118 14482139 IRF1 JASPAR yes 112567205
chr19 14482119 14482134 FOXP1 JASPAR yes 112567206
chr19 14482119 14482140 IRF1 JASPAR yes 112567207
chr19 14482120 14482131 FOXP2 JASPAR yes 112567208
chr19 14482120 14482140 RREB1 JASPAR yes 112567209
chr19 14482121 14482136 FOXP1 JASPAR yes 112567210
chr19 14482123 14482138 FOXP1 JASPAR yes 112567211
chr19 14482124 14482139 FOXP1 JASPAR yes 112567212
chr19 14482125 14482140 FOXP1 JASPAR yes 112567213
chr19 14482125 14482145 RREB1 JASPAR yes 112567214
chr19 14482125 14482146 IRF1 JASPAR yes 112567215
chr19 14482126 14482147 IRF1 JASPAR yes 112567216
chr19 14482127 14482142 FOXP1 JASPAR yes 112567217
chr19 14482130 14482144 IRF7 JASPAR yes 112567218
Genes associated with rs541119611[chr19:14482130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More