EnhancerDB
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  3. rs541128520[chr17:79700653]
Enhancers that have rs541128520[chr17:79700653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541128520[chr17:79700653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 21798308
chr17 79697872 79702757 TCF7L2 GTRD no Colon (HCT116) 108310128
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 21798310
chr17 79698203 79702705 TCF7L2 GTRD no Colon (HCT116) 108310134
chr17 79698423 79701576 TCF7L2 GTRD no Colon (HCT116) 21798312
chr17 79698423 79701576 TCF7L2 GTRD no Colon (HCT116) 108310138
chr17 79698493 79701154 TCF7L2 GTRD no Colon (HCT116) 21798314
chr17 79698680 79700810 TCF7L2 GTRD no Colon (HCT116) 21798315
chr17 79698758 79700675 TCF7L2 GTRD no Colon (HCT116) 21798316
chr17 79698846 79701373 TCF7L2 GTRD no Colon (HCT116) 21798317
chr17 79698921 79702115 TCF7L2 GTRD no Colon (HCT116) 21798320
chr17 79700212 79700944 TCF7L2 GTRD no Colon (HCT116) 21798326
chr17 79700337 79701127 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798327
chr17 79700577 79701319 ZNF143 GTRD no Epithelial (MCF-7) 21798328
chr17 79700644 79700665 IRF1 JASPAR yes 56340719
chr17 79700647 79700661 ONECUT3 JASPAR yes 56340720
chr17 79700649 79700664 RUNX2 JASPAR yes 56340721
Genes associated with rs541128520[chr17:79700653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More