EnhancerDB
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  3. rs541160536[chr2:238359771]
Enhancers that have rs541160536[chr2:238359771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238336205 238371002 enh19393
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541160536[chr2:238359771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238359755 238359776 IRF1 JASPAR yes 82110971
chr2 238359757 238359772 PRDM1 JASPAR yes 82110972
chr2 238359759 238359771 IRF1 JASPAR yes 82110973
chr2 238359759 238359773 IRF7 JASPAR yes 82110974
Genes associated with rs541160536[chr2:238359771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More