EnhancerDB
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  3. rs541174301[chr19:5020242]
Enhancers that have rs541174301[chr19:5020242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5019125 5039375 enh4975
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs541174301[chr19:5020242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5020234 5020247 ZBTB18 JASPAR yes 112206130
chr19 5020236 5020245 SNAI2 JASPAR yes 112206131
chr19 5020236 5020246 FIGLA JASPAR yes 112206132
chr19 5020236 5020246 ID4 JASPAR yes 112206133
chr19 5020236 5020246 TCF3 JASPAR yes 112206134
chr19 5020236 5020246 TCF4 JASPAR yes 112206135
Genes associated with rs541174301[chr19:5020242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More