EnhancerDB
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  3. rs541204207[chr17:42620874]
Enhancers that have rs541204207[chr17:42620874]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42617298 42627575 enh17183
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Stomach
Transcript factors that have rs541204207[chr17:42620874]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42620368 42620948 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21762417
chr17 42620368 42620948 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108262987
chr17 42620368 42620948 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108262988
chr17 42620374 42620974 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21762418
chr17 42620374 42620974 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108262989
chr17 42620374 42620974 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108262990
chr17 42620400 42620904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21762419
chr17 42620400 42620904 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108262991
chr17 42620412 42620988 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108262992
chr17 42620412 42620988 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108262993
chr17 42620432 42620952 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108262995
chr17 42620432 42620952 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108262996
chr17 42620459 42620900 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108262997
chr17 42620459 42621528 EP300 UCSC Txn Factor no Conserved 108262998
chr17 42620459 42621528 EP300 UCSC Txn Factor no Conserved 108262999
chr17 42620467 42620879 TCF12 UCSC Txn Factor no Conserved 108263000
chr17 42620467 42620879 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108263001
chr17 42620471 42620991 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21762420
chr17 42620471 42620991 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263002
chr17 42620471 42620991 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263003
chr17 42620494 42621164 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21762422
chr17 42620494 42621164 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263005
chr17 42620494 42621164 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263006
chr17 42620513 42620889 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21762424
chr17 42620513 42620889 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263010
chr17 42620574 42621174 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21762434
chr17 42620574 42621174 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263023
chr17 42620574 42621174 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263024
chr17 42620589 42620893 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21762437
chr17 42620589 42620893 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263027
chr17 42620640 42621236 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108263030
chr17 42620640 42621236 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108263031
chr17 42620684 42621141 ZNF274 GTRD no Blood (GM12878) 108263033
chr17 42620684 42621141 ZNF274 GTRD no Blood (GM12878) 108263034
chr17 42620730 42621234 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108263035
chr17 42620730 42621234 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108263036
chr17 42620855 42621292 ZNF274 GTRD no Liver (HepG2) 108263037
chr17 42620862 42620876 EBF1 JASPAR yes 54405617
chr17 42620863 42620874 EBF1 JASPAR yes 54405618
chr17 42620864 42620875 EBF1 JASPAR yes 54405619
chr17 42620870 42620875 SP1 TRANSFAC yes 54405620
chr17 42620871 42621411 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108263038
Genes associated with rs541204207[chr17:42620874], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More