EnhancerDB
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  3. rs541252180[chr16:5001683]
Enhancers that have rs541252180[chr16:5001683]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4988771 5002255 enh16521
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs541252180[chr16:5001683]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 5001671 5001689 RARA JASPAR yes 9294533
chr16 5001678 5001691 NR2F1 JASPAR yes 9294534
chr16 5001682 5001690 CREB1 JASPAR yes 9294535
Genes associated with rs541252180[chr16:5001683], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More