EnhancerDB
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  3. rs541335071[chr1:44223609]
Enhancers that have rs541335071[chr1:44223609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 44221165 44237481 enh300
Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Muscle (A673) Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541335071[chr1:44223609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44223594 44223609 FOXP1 JASPAR yes 28515290
chr1 44223603 44223609 SOX10 JASPAR yes 28515291
chr1 44223603 44223617 ONECUT2 JASPAR yes 28515292
chr1 44223603 44223617 ONECUT3 JASPAR yes 28515293
chr1 44223604 44223615 FOXA1 JASPAR yes 28515294
chr1 44223604 44223619 FOXA1 JASPAR yes 28515295
chr1 44223605 44223616 FOXB1 JASPAR yes 28515296
chr1 44223605 44223616 FOXC1 JASPAR yes 28515297
chr1 44223605 44223617 FOXC2 JASPAR yes 28515298
Genes associated with rs541335071[chr1:44223609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More