EnhancerDB
  1. Home
  2. SNP
  3. rs541343326[chr1:25007009]
Enhancers that have rs541343326[chr1:25007009]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541343326[chr1:25007009]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25007005 25007009 NFE TRANSFAC yes 27517120
chr1 25007009 25007024 FOXP1 JASPAR yes 27517121
Genes associated with rs541343326[chr1:25007009], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More