EnhancerDB
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  3. rs541403985[chr1:12555199]
Enhancers that have rs541403985[chr1:12555199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12527565 12557135 enh11513
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs541403985[chr1:12555199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12555189 12555200 NFIL3 JASPAR yes 26826217
chr1 12555195 12555209 SPIC JASPAR yes 26826219
chr1 12555197 12555218 IRF1 JASPAR yes 26826220
chr1 12555198 12555219 IRF1 JASPAR yes 26826221
chr1 12555199 12555220 IRF1 JASPAR yes 26826222
Genes associated with rs541403985[chr1:12555199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More