EnhancerDB
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  3. rs541419715[chr12:96593461]
Enhancers that have rs541419715[chr12:96593461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541419715[chr12:96593461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96593457 96593472 HNF4A JASPAR yes 123046217
chr12 96593458 96593472 RXRB JASPAR yes 123046218
chr12 96593458 96593472 RXRG JASPAR yes 123046219
chr12 96593458 96593473 HNF4G JASPAR yes 123046220
chr12 96593458 96593473 LEF1 JASPAR yes 123046221
chr12 96593458 96593473 NR2C2 JASPAR yes 123046222
Genes associated with rs541419715[chr12:96593461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More