EnhancerDB
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  3. rs541421290[chr11:68891059]
Enhancers that have rs541421290[chr11:68891059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 68880405 68893875 enh47499
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Stomach Muscle (A673) Thyroid Breast Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs541421290[chr11:68891059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 68889460 68892193 ZNF143 GTRD no Epithelial (MCF-7) 21498673
chr11 68889535 68891166 ZNF143 GTRD no Epithelial (MCF-7) 21498674
chr11 68889626 68891121 ZNF143 GTRD no Epithelial (MCF-7) 21498675
chr11 68889896 68891242 ZNF143 GTRD no Epithelial (MCF-7) 21498680
chr11 68889908 68891723 ZNF143 GTRD no Epithelial (MCF-7) 21498681
chr11 68889914 68891076 ZNF143 GTRD no Epithelial (MCF-7) 21498682
chr11 68889961 68891897 ZNF143 GTRD no Epithelial (MCF-7) 21498684
chr11 68889992 68891074 ZNF143 GTRD no Epithelial (MCF-7) 21498686
chr11 68890003 68891135 ZNF143 GTRD no Epithelial (MCF-7) 21498687
chr11 68890084 68891257 ZNF143 GTRD no Epithelial (MCF-7) 21498693
chr11 68890120 68891130 ZNF143 GTRD no Epithelial (MCF-7) 21498698
chr11 68890485 68891283 ZNF143 GTRD no Epithelial (MCF-7) 21498750
chr11 68890491 68891249 ZNF143 GTRD no Epithelial (MCF-7) 21498751
chr11 68890550 68892016 ZNF143 GTRD no Epithelial (MCF-7) 21498752
chr11 68890645 68891399 MYOD GTRD no Muscle (Myoblast) 21498753
chr11 68890691 68891912 ZNF143 GTRD no Epithelial (MCF-7) 21498754
chr11 68890750 68891890 ZNF143 GTRD no Epithelial (MCF-7) 21498755
chr11 68890861 68891344 ZNF143 GTRD no Epithelial (MCF-7) 21498756
chr11 68890939 68891384 ZNF143 GTRD no Epithelial (MCF-7) 21498757
chr11 68890971 68891281 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21498758
chr11 68891053 68891153 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21498759
chr11 68891054 68891807 ZNF143 GTRD no Epithelial (MCF-7) 21498760
chr11 68891055 68891067 GLI2 JASPAR yes 39504689
Genes associated with rs541421290[chr11:68891059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More