EnhancerDB
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  3. rs541450830[chr2:224698599]
Enhancers that have rs541450830[chr2:224698599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224677744 224699315 enh34325
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541450830[chr2:224698599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224698594 224698609 FOXP1 JASPAR yes 81292776
chr2 224698596 224698612 POU4F2 JASPAR yes 81292777
chr2 224698596 224698612 POU4F3 JASPAR yes 81292778
chr2 224698597 224698612 FOXA1 JASPAR yes 81292779
chr2 224698598 224698610 FOXI1 JASPAR yes 81292780
chr2 224698598 224698612 POU4F1 JASPAR yes 81292781
chr2 224698598 224698613 FOXP1 JASPAR yes 81292782
chr2 224698598 224698613 HNF1A JASPAR yes 81292783
chr2 224698599 224698611 FOXC2 JASPAR yes 81292784
chr2 224698599 224698613 ONECUT2 JASPAR yes 81292785
chr2 224698599 224698613 ONECUT3 JASPAR yes 81292786
Genes associated with rs541450830[chr2:224698599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More