EnhancerDB
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  3. rs541489002[chr1:28566047]
Enhancers that have rs541489002[chr1:28566047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28563689 28580455 enh185
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs541489002[chr1:28566047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28566029 28566050 IRF1 JASPAR yes 27752404
chr1 28566035 28566050 MEF2C JASPAR yes 27752405
chr1 28566046 28566050 YY1 TRANSFAC yes 27752408
Genes associated with rs541489002[chr1:28566047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More