EnhancerDB
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  3. rs541490[chr16:88995216]
Enhancers that have rs541490[chr16:88995216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88969235 88997095 enh16904
Bone Marrow (K562) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs541490[chr16:88995216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88990176 88996491 ZNF274 GTRD no Bone Marrow (K562) 21737354
chr16 88990176 88996491 ZNF274 GTRD no Bone Marrow (K562) 108224323
chr16 88990177 88996763 ZNF274 GTRD no Bone Marrow (K562) 21737355
chr16 88990177 88996763 ZNF274 GTRD no Bone Marrow (K562) 108224324
chr16 88990381 88996100 ZNF274 GTRD no Bone Marrow (K562) 21737357
chr16 88990381 88996100 ZNF274 GTRD no Bone Marrow (K562) 108224326
chr16 88995213 88995219 YY1 JASPAR yes 12310828
Genes associated with rs541490[chr16:88995216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More