EnhancerDB
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  3. rs541516175[chr1:208006753]
Enhancers that have rs541516175[chr1:208006753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541516175[chr1:208006753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208006152 208009109 ZBTB33 GTRD no Brain (SK-N-SH) 21374566
chr1 208006617 208009171 ZBTB33 GTRD no Brain (SK-N-SH) 21374567
chr1 208006657 208007207 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374568
chr1 208006728 208007032 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374569
chr1 208006744 208006755 FOXB1 JASPAR yes 34880262
chr1 208006745 208006753 FOXL1 JASPAR yes 34880263
chr1 208006746 208006756 MEF2A JASPAR yes 34880264
chr1 208006747 208006755 FOXL1 JASPAR yes 34880265
chr1 208006751 208006755 TEAD2 TRANSFAC yes 34880266
Genes associated with rs541516175[chr1:208006753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More