EnhancerDB
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  3. rs541530659[chr17:78833520]
Enhancers that have rs541530659[chr17:78833520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs541530659[chr17:78833520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78833514 78833524 BHLHE40 JASPAR yes 56286340
chr17 78833514 78833524 CLOCK JASPAR yes 56286341
chr17 78833514 78833524 HEY1 JASPAR yes 56286342
chr17 78833514 78833524 MAX JASPAR yes 56286343
chr17 78833514 78833524 MNT JASPAR yes 56286344
chr17 78833516 78833521 MYC TRANSFAC yes 56286345
chr17 78833516 78833521 USF1 TRANSFAC yes 56286346
chr17 78833516 78833521 USF2 TRANSFAC yes 56286347
Genes associated with rs541530659[chr17:78833520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More