EnhancerDB
  1. Home
  2. SNP
  3. rs541546857[chr1:235266582]
Enhancers that have rs541546857[chr1:235266582]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235261105 235271828 enh998
Skin (Keratinocyte) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs541546857[chr1:235266582]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235266571 235266582 CDX2 JASPAR yes 36352674
chr1 235266572 235266583 HOXA10 JASPAR yes 36352675
chr1 235266573 235266582 CDX1 JASPAR yes 36352676
Genes associated with rs541546857[chr1:235266582], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More