EnhancerDB
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  3. rs541558647[chr1:23926489]
Enhancers that have rs541558647[chr1:23926489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs541558647[chr1:23926489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23926486 23926491 SP1 TRANSFAC yes 27445868
chr1 23926487 23926499 ZBTB7B JASPAR yes 27445869
chr1 23926487 23926499 ZBTB7C JASPAR yes 27445870
chr1 23926488 23926500 ZBTB7A JASPAR yes 27445871
Genes associated with rs541558647[chr1:23926489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More