EnhancerDB
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  3. rs541571960[chr1:23153561]
Enhancers that have rs541571960[chr1:23153561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23150145 23164575 enh122
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Placenta Colon (HCT116) Breast Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs541571960[chr1:23153561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23153549 23153570 ZNF263 JASPAR yes 27395717
chr1 23153557 23153567 SP1 JASPAR yes 27395719
chr1 23153559 23153570 ELK4 JASPAR yes 27395720
chr1 23153559 23153570 FLI1 JASPAR yes 27395721
chr1 23153560 23153573 ELF1 JASPAR yes 27395722
Genes associated with rs541571960[chr1:23153561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More