EnhancerDB
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  3. rs541586823[chr18:55902520]
Enhancers that have rs541586823[chr18:55902520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55895930 55912515 enh17738
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Heart
Transcript factors that have rs541586823[chr18:55902520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55902505 55902521 SOX8 JASPAR yes 110930697
chr18 55902510 55902520 HOXA13 JASPAR yes 110930698
chr18 55902510 55902520 HOXB13 JASPAR yes 110930699
chr18 55902510 55902520 HOXD13 JASPAR yes 110930700
chr18 55902510 55902521 HOXA10 JASPAR yes 110930701
chr18 55902511 55902520 CDX1 JASPAR yes 110930702
chr18 55902511 55902522 CDX2 JASPAR yes 110930703
chr18 55902520 55902531 NFE2L2 JASPAR yes 110930704
Genes associated with rs541586823[chr18:55902520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More