EnhancerDB
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  3. rs541610026[chr17:79690232]
Enhancers that have rs541610026[chr17:79690232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541610026[chr17:79690232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79689686 79690302 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798240
chr17 79690024 79690888 TCF7L2 GTRD no Colon (HCT116) 21798241
chr17 79690100 79691166 TCF7L2 GTRD no Colon (HCT116) 21798242
chr17 79690176 79691022 TCF7L2 GTRD no Colon (HCT116) 21798243
chr17 79690179 79691026 TCF7L2 GTRD no Colon (HCT116) 21798244
chr17 79690226 79690240 PLAG1 JASPAR yes 56339159
Genes associated with rs541610026[chr17:79690232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More