EnhancerDB
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  3. rs541613853[chr18:55953996]
Enhancers that have rs541613853[chr18:55953996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55950385 55972855 enh32735
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Lung Lung (A549) Blood (GM12878) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Blood (T-cell) Heart
Transcript factors that have rs541613853[chr18:55953996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55953986 55953996 ALX3 JASPAR yes 110936850
chr18 55953986 55953996 GSX2 JASPAR yes 110936851
chr18 55953986 55953996 MIXL1 JASPAR yes 110936852
chr18 55953986 55953996 MNX1 JASPAR yes 110936853
chr18 55953987 55954003 POU4F2 JASPAR yes 110936861
chr18 55953988 55953998 PAX7 JASPAR yes 110936862
chr18 55953988 55953999 PHOX2A JASPAR yes 110936863
chr18 55953990 55954002 HNF1B JASPAR yes 110936865
Genes associated with rs541613853[chr18:55953996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More