EnhancerDB
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  3. rs541638658[chr17:60256916]
Enhancers that have rs541638658[chr17:60256916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60253851 60272895 enh17275
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541638658[chr17:60256916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60256493 60258596 ZNF143 GTRD no Epithelial (MCF-7) 21777913
chr17 60256493 60258596 ZNF143 GTRD no Epithelial (MCF-7) 108280374
chr17 60256568 60257064 ZBTB33 GTRD no Lung (A549) 108280375
chr17 60256835 60257275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21777914
chr17 60256835 60257275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108280376
chr17 60256847 60257237 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21777915
chr17 60256847 60257237 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108280377
chr17 60256852 60257248 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777916
chr17 60256852 60257248 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108280378
chr17 60256859 60257323 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21777917
chr17 60256859 60257323 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108280379
chr17 60256868 60257198 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777918
chr17 60256868 60257198 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108280380
chr17 60256876 60257276 FOS UCSC Txn Factor no Conserved 108280381
chr17 60256877 60257187 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21777919
chr17 60256877 60257187 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108280382
chr17 60256895 60257255 JUN UCSC Txn Factor no Conserved 108280383
chr17 60256897 60257253 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108280384
chr17 60256906 60257256 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21777920
chr17 60256906 60257256 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108280385
chr17 60256911 60257151 USF1 UCSC Txn Factor no Conserved 108280386
chr17 60256912 60257276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21777921
chr17 60256912 60257276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108280387
chr17 60256913 60256928 FOXP1 JASPAR yes 55190259
chr17 60256914 60256929 FOXP1 JASPAR yes 55190260
chr17 60256915 60256930 FOXP1 JASPAR yes 55190261
chr17 60256915 60256936 IRF1 JASPAR yes 55190262
chr17 60256915 60257255 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777922
chr17 60256915 60257255 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108280388
chr17 60256916 60256931 FOXP1 JASPAR yes 55190263
chr17 60256916 60256937 IRF1 JASPAR yes 55190264
chr17 60256916 60257260 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21777923
chr17 60256916 60257260 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108280389
Genes associated with rs541638658[chr17:60256916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More