EnhancerDB
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  3. rs541640626[chr1:53602296]
Enhancers that have rs541640626[chr1:53602296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53585345 53605635 enh11856
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Stomach Placenta Uterus Blood (T-cell) Heart
Transcript factors that have rs541640626[chr1:53602296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53602285 53602296 FOXA1 JASPAR yes 28914967
chr1 53602285 53602300 FOXA1 JASPAR yes 28914968
chr1 53602286 53602297 FOXB1 JASPAR yes 28914969
chr1 53602286 53602297 FOXC1 JASPAR yes 28914970
chr1 53602286 53602298 FOXC2 JASPAR yes 28914971
chr1 53602287 53602298 FOXP2 JASPAR yes 28914972
chr1 53602287 53602299 FOXI1 JASPAR yes 28914973
chr1 53602287 53602299 POU3F1 JASPAR yes 28914974
chr1 53602287 53602300 POU3F3 JASPAR yes 28914975
chr1 53602289 53602297 FOXG1 JASPAR yes 28914978
chr1 53602290 53602298 FOXL1 JASPAR yes 28914979
Genes associated with rs541640626[chr1:53602296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More