EnhancerDB
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  3. rs541676251[chr17:70353220]
Enhancers that have rs541676251[chr17:70353220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs541676251[chr17:70353220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70352573 70353348 P63 GTRD no Skin (Keratinocyte) 21784246
chr17 70352617 70353350 P63 GTRD no Skin (Keratinocyte) 21784247
chr17 70352760 70353329 ZNF274 GTRD no Liver (HepG2) 21784248
chr17 70352818 70353347 ZNF274 GTRD no Liver (HepG2) 21784249
chr17 70352828 70353280 ZNF274 GTRD no Liver (HepG2) 21784250
chr17 70352829 70353302 P63 GTRD no Skin (Keratinocyte) 21784251
chr17 70353209 70353229 PPARG JASPAR yes 55777051
Genes associated with rs541676251[chr17:70353220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More