EnhancerDB
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  3. rs541708190[chr4:8189286]
Enhancers that have rs541708190[chr4:8189286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 8181827 8200055 enh21355
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs541708190[chr4:8189286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 8189265 8189286 IRF1 JASPAR yes 88164354
chr4 8189266 8189287 IRF1 JASPAR yes 88164356
chr4 8189270 8189291 IRF1 JASPAR yes 88164358
chr4 8189271 8189286 FOXP1 JASPAR yes 88164359
chr4 8189271 8189292 IRF1 JASPAR yes 88164360
chr4 8189275 8189296 IRF1 JASPAR yes 88164361
chr4 8189276 8189291 FOXP1 JASPAR yes 88164362
chr4 8189276 8189297 IRF1 JASPAR yes 88164363
chr4 8189278 8189293 FOXP1 JASPAR yes 88164364
chr4 8189280 8189295 FOXP1 JASPAR yes 88164365
chr4 8189281 8189296 FOXP1 JASPAR yes 88164366
chr4 8189282 8189297 FOXP1 JASPAR yes 88164367
chr4 8189283 8189298 FOXP1 JASPAR yes 88164368
Genes associated with rs541708190[chr4:8189286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More