EnhancerDB
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  3. rs541720714[chr5:171577063]
Enhancers that have rs541720714[chr5:171577063]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs541720714[chr5:171577063]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171577048 171577063 FOXP1 JASPAR yes 67768177
chr5 171577049 171577064 FOXP1 JASPAR yes 67768178
chr5 171577050 171577065 FOXP1 JASPAR yes 67768179
chr5 171577050 171577071 IRF1 JASPAR yes 67768180
chr5 171577051 171577066 FOXP1 JASPAR yes 67768181
chr5 171577051 171577072 IRF1 JASPAR yes 67768182
chr5 171577052 171577067 FOXP1 JASPAR yes 67768183
chr5 171577052 171577073 IRF1 JASPAR yes 67768184
chr5 171577053 171577068 FOXP1 JASPAR yes 67768185
chr5 171577053 171577074 IRF1 JASPAR yes 67768186
chr5 171577054 171577069 FOXP1 JASPAR yes 67768187
chr5 171577054 171577075 IRF1 JASPAR yes 67768188
chr5 171577055 171577070 FOXP1 JASPAR yes 67768189
chr5 171577055 171577076 IRF1 JASPAR yes 67768190
chr5 171577056 171577071 FOXP1 JASPAR yes 67768191
chr5 171577056 171577077 IRF1 JASPAR yes 67768192
chr5 171577057 171577072 FOXP1 JASPAR yes 67768193
chr5 171577059 171577074 FOXP1 JASPAR yes 67768194
chr5 171577060 171577081 IRF1 JASPAR yes 67768195
chr5 171577061 171577076 FOXP1 JASPAR yes 67768196
Genes associated with rs541720714[chr5:171577063], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More