EnhancerDB
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  3. rs541726689[chr1:52006459]
Enhancers that have rs541726689[chr1:52006459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs541726689[chr1:52006459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52006447 52006460 NFKB1 JASPAR yes 28847760
chr1 52006447 52006460 NFKB2 JASPAR yes 28847761
Genes associated with rs541726689[chr1:52006459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More