EnhancerDB
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  3. rs541742429[chr2:228371252]
Enhancers that have rs541742429[chr2:228371252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228362445 228384435 enh19286
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs541742429[chr2:228371252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228371237 228371254 PAX1 JASPAR yes 81529974
chr2 228371240 228371257 PAX1 JASPAR yes 81529975
chr2 228371240 228371257 PAX9 JASPAR yes 81529976
chr2 228371241 228371260 PAX5 JASPAR yes 81529977
chr2 228371249 228371261 TGIF1 JASPAR yes 81529978
chr2 228371249 228371261 TGIF2 JASPAR yes 81529979
chr2 228371252 228371266 TCF7L2 JASPAR yes 81529980
Genes associated with rs541742429[chr2:228371252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More