EnhancerDB
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  3. rs541780189[chr2:235201835]
Enhancers that have rs541780189[chr2:235201835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235192981 235207115 enh6214
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs541780189[chr2:235201835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235201824 235201836 FOXI1 JASPAR yes 81863320
chr2 235201826 235201840 SPIC JASPAR yes 81863321
chr2 235201829 235201844 FOXP1 JASPAR yes 81863322
chr2 235201832 235201847 FOXP1 JASPAR yes 81863323
Genes associated with rs541780189[chr2:235201835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More