EnhancerDB
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  3. rs541832117[chr1:17879066]
Enhancers that have rs541832117[chr1:17879066]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs541832117[chr1:17879066]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17879054 17879075 IRF1 JASPAR yes 27100729
chr1 17879055 17879076 IRF1 JASPAR yes 27100730
chr1 17879056 17879070 POU1F1 JASPAR yes 27100731
chr1 17879057 17879072 STAT2 JASPAR yes 27100732
chr1 17879058 17879072 STAT1 JASPAR yes 27100733
chr1 17879059 17879071 IRF1 JASPAR yes 27100734
chr1 17879059 17879073 IRF7 JASPAR yes 27100735
chr1 17879059 17879074 IRF9 JASPAR yes 27100736
chr1 17879060 17879081 IRF1 JASPAR yes 27100737
chr1 17879061 17879082 IRF1 JASPAR yes 27100738
chr1 17879062 17879083 IRF1 JASPAR yes 27100739
chr1 17879063 17879084 IRF1 JASPAR yes 27100740
chr1 17879064 17879085 IRF1 JASPAR yes 27100741
chr1 17879065 17879080 FOXP1 JASPAR yes 27100742
chr1 17879065 17879086 IRF1 JASPAR yes 27100743
chr1 17879066 17879081 FOXP1 JASPAR yes 27100744
chr1 17879066 17879087 IRF1 JASPAR yes 27100745
Genes associated with rs541832117[chr1:17879066], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More