EnhancerDB
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  3. rs541843519[chr3:188668941]
Enhancers that have rs541843519[chr3:188668941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 188663255 188677255 enh21197
Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Heart
chr3 188668723 188669229 vista43593
VISTA
Transcript factors that have rs541843519[chr3:188668941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188668630 188669155 GATA2 UCSC Txn Factor no Conserved 108531406
chr3 188668692 188669032 JUN UCSC Txn Factor no Conserved 108531407
chr3 188668700 188669041 FOSL2 UCSC Txn Factor no Conserved 108531408
chr3 188668710 188669018 FOS UCSC Txn Factor no Conserved 108531409
chr3 188668724 188669000 JUND UCSC Txn Factor no Conserved 108531410
chr3 188668930 188668946 E2F2 JASPAR yes 8532098
chr3 188668930 188668946 E2F2 JASPAR yes 71105920
chr3 188668941 188668945 YY1 TRANSFAC yes 8532099
chr3 188668941 188668945 YY1 TRANSFAC yes 71105921
Genes associated with rs541843519[chr3:188668941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More