EnhancerDB
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  3. rs541853379[chr1:244467969]
Enhancers that have rs541853379[chr1:244467969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244459065 244471355 enh12849
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Placenta Thyroid Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs541853379[chr1:244467969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244467343 244468003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21405357
chr1 244467343 244468003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107888388
chr1 244467454 244468056 TFAP2C UCSC Txn Factor no Conserved 107888392
chr1 244467516 244468046 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21405363
chr1 244467516 244468046 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107888395
chr1 244467540 244468056 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21405364
chr1 244467540 244468056 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107888396
chr1 244467953 244467974 IRF1 JASPAR yes 36725954
chr1 244467958 244467979 IRF1 JASPAR yes 36725955
chr1 244467959 244467974 FOXP1 JASPAR yes 36725956
chr1 244467959 244467980 IRF1 JASPAR yes 36725957
chr1 244467960 244467971 FOXP2 JASPAR yes 36725958
chr1 244467960 244467972 FOXC2 JASPAR yes 36725959
chr1 244467960 244467975 STAT2 JASPAR yes 36725960
chr1 244467962 244467973 FOXA1 JASPAR yes 36725961
chr1 244467963 244467984 IRF1 JASPAR yes 36725962
chr1 244467964 244467979 FOXP1 JASPAR yes 36725963
chr1 244467966 244467987 IRF1 JASPAR yes 36725964
chr1 244467967 244467988 IRF1 JASPAR yes 36725965
chr1 244467968 244467983 FOXP1 JASPAR yes 36725966
chr1 244467968 244467989 IRF1 JASPAR yes 36725967
Genes associated with rs541853379[chr1:244467969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More