EnhancerDB
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  3. rs541855337[chr19:4975604]
Enhancers that have rs541855337[chr19:4975604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541855337[chr19:4975604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 21842893
chr19 4975153 4977554 TEF1 GTRD no Bone (Osteoblast) 108374027
chr19 4975598 4975619 IRF1 JASPAR yes 112201132
chr19 4975599 4975620 IRF1 JASPAR yes 112201133
chr19 4975603 4975618 FOXP1 JASPAR yes 112201134
chr19 4975604 4975619 FOXP1 JASPAR yes 112201135
Genes associated with rs541855337[chr19:4975604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More