EnhancerDB
  1. Home
  2. SNP
  3. rs541864686[chr1:12652402]
Enhancers that have rs541864686[chr1:12652402]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs541864686[chr1:12652402]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12652396 12652408 GLI2 JASPAR yes 26836398
chr1 12652399 12652404 SP1 TRANSFAC yes 26836399
Genes associated with rs541864686[chr1:12652402], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More