EnhancerDB
  1. Home
  2. SNP
  3. rs541870223[chr1:202055376]
Enhancers that have rs541870223[chr1:202055376]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 202055098 202055409 vista4596
VISTA
Transcript factors that have rs541870223[chr1:202055376]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 21366717
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857734
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857735
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857736
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 21366731
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857746
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857747
chr1 202054618 202055379 ZNF143 GTRD no Epithelial (MCF-7) 21366732
chr1 202054618 202055379 ZNF143 GTRD no Epithelial (MCF-7) 107857748
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 21366733
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857749
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857750
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 21366737
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857753
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857754
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 21366738
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 107857755
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 107857756
chr1 202054888 202055468 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107857757
chr1 202054928 202055426 ZNF274 GTRD no Bone Marrow (K562) 21366740
chr1 202054928 202055426 ZNF274 GTRD no Bone Marrow (K562) 107857759
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 21366741
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857760
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857761
chr1 202054969 202055499 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366743
chr1 202054969 202055499 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857763
chr1 202054995 202055385 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366744
chr1 202054995 202055385 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857765
chr1 202054995 202055511 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366745
chr1 202054995 202055511 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857766
chr1 202055070 202055460 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366750
chr1 202055070 202055460 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857772
chr1 202055073 202055409 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366751
chr1 202055073 202055409 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857773
chr1 202055088 202055378 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366752
chr1 202055088 202055378 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857774
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 21366754
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 107857776
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 107857777
chr1 202055109 202055469 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366755
chr1 202055109 202055469 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857778
chr1 202055127 202055583 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366756
chr1 202055127 202055583 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857779
chr1 202055133 202055473 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366757
chr1 202055133 202055473 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857780
chr1 202055148 202055380 SOX2 GTRD no Neural Stem Cells (H9) 21366758
chr1 202055148 202055380 SOX2 GTRD no Neural Stem Cells (H9) 107857781
chr1 202055148 202055548 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366759
chr1 202055148 202055548 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857782
chr1 202055155 202055415 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366760
chr1 202055155 202055415 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857783
chr1 202055185 202055461 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366761
chr1 202055185 202055461 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857784
chr1 202055189 202055499 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21366762
chr1 202055189 202055499 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857785
chr1 202055190 202055480 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366763
chr1 202055190 202055480 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857786
chr1 202055195 202055531 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107857787
chr1 202055216 202055656 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366764
chr1 202055216 202055656 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857788
chr1 202055227 202055477 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366765
chr1 202055227 202055477 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857789
chr1 202055247 202055447 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366767
chr1 202055247 202055447 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857791
chr1 202055251 202055550 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366768
chr1 202055251 202055550 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857792
chr1 202055280 202055440 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366769
chr1 202055280 202055440 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857793
chr1 202055373 202055382 TFAP2A JASPAR yes 34551651
chr1 202055373 202055382 TFAP2A JASPAR yes 118433950
Genes associated with rs541870223[chr1:202055376], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More