EnhancerDB
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  3. rs541920803[chr16:85196854]
Enhancers that have rs541920803[chr16:85196854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs541920803[chr16:85196854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85195349 85197162 ZNF274 GTRD no Liver (HepG2) 21720505
chr16 85195349 85197162 ZNF274 GTRD no Liver (HepG2) 108213490
chr16 85195424 85196865 ZNF274 GTRD no Liver (HepG2) 21720506
chr16 85195424 85196865 ZNF274 GTRD no Liver (HepG2) 108213491
chr16 85195794 85196952 ZNF274 GTRD no Liver (HepG2) 21720508
chr16 85195794 85196952 ZNF274 GTRD no Liver (HepG2) 108213493
chr16 85195950 85196968 ZNF274 GTRD no Liver (HepG2) 21720513
chr16 85195950 85196968 ZNF274 GTRD no Liver (HepG2) 108213499
chr16 85196849 85196861 E2F1 JASPAR yes 12027541
Genes associated with rs541920803[chr16:85196854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More