EnhancerDB
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  3. rs541932166[chr1:207987187]
Enhancers that have rs541932166[chr1:207987187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs541932166[chr1:207987187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207986806 207987196 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374099
chr1 207986959 207987406 ZNF143 GTRD no Epithelial (MCF-7) 21374100
chr1 207987044 207987586 ZBTB33 GTRD no Brain (SK-N-SH) 21374101
chr1 207987045 207987500 ZBTB33 GTRD no Brain (SK-N-SH) 21374102
chr1 207987141 207987434 ZBTB33 GTRD no Brain (SK-N-SH) 21374103
chr1 207987185 207987199 GLIS3 JASPAR yes 34877603
Genes associated with rs541932166[chr1:207987187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More