EnhancerDB
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  3. rs541947642[chr17:57513997]
Enhancers that have rs541947642[chr17:57513997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57510669 57520490 enh4503
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Astrocyte Lung Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs541947642[chr17:57513997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57513026 57515484 ZNF143 GTRD no Epithelial (MCF-7) 21775084
chr17 57513026 57515484 ZNF143 GTRD no Epithelial (MCF-7) 108276055
chr17 57513035 57515360 ZNF143 GTRD no Epithelial (MCF-7) 21775085
chr17 57513035 57515360 ZNF143 GTRD no Epithelial (MCF-7) 108276056
chr17 57513078 57514320 ZNF143 GTRD no Epithelial (MCF-7) 21775088
chr17 57513104 57514221 ZNF143 GTRD no Epithelial (MCF-7) 21775090
chr17 57513119 57515431 ZNF143 GTRD no Epithelial (MCF-7) 21775092
chr17 57513119 57515431 ZNF143 GTRD no Epithelial (MCF-7) 108276057
chr17 57513152 57514174 ZNF143 GTRD no Epithelial (MCF-7) 21775093
chr17 57513160 57514311 ZNF143 GTRD no Epithelial (MCF-7) 21775094
chr17 57513172 57514108 ZNF143 GTRD no Epithelial (MCF-7) 21775095
chr17 57513245 57514023 ZNF143 GTRD no Epithelial (MCF-7) 21775096
chr17 57513250 57514090 ZNF143 GTRD no Epithelial (MCF-7) 21775097
chr17 57513338 57514189 ZNF143 GTRD no Epithelial (MCF-7) 21775099
chr17 57513396 57514142 MEF2B GTRD no Blood (Karpas-422) 21775100
chr17 57513986 57513997 FOXB1 JASPAR yes 55060289
chr17 57513992 57514005 POU3F3 JASPAR yes 55060291
chr17 57513993 57514005 POU3F1 JASPAR yes 55060292
chr17 57513993 57514006 POU2F2 JASPAR yes 55060293
chr17 57513994 57514002 FOXL1 JASPAR yes 55060294
chr17 57513994 57514003 POU3F4 JASPAR yes 55060295
chr17 57513994 57514005 FOXB1 JASPAR yes 55060296
Genes associated with rs541947642[chr17:57513997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More