EnhancerDB
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  3. rs541949995[chr17:70397024]
Enhancers that have rs541949995[chr17:70397024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs541949995[chr17:70397024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70397009 70397024 FOXA1 JASPAR yes 55783496
chr17 70397019 70397034 NR2C2 JASPAR yes 55783497
chr17 70397020 70397025 TFAP2A TRANSFAC yes 55783498
chr17 70397020 70397026 MZF1 JASPAR yes 55783499
chr17 70397022 70397027 ETS2 TRANSFAC yes 55783500
Genes associated with rs541949995[chr17:70397024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More